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Here we provide percent contribution of mineral associated (i.e., heavy fraction - HF) and relatively more labile (i.e., light fraction - LF) organic matter through soil profiles and along hillslope catena within sites in the Critical Zone Network (CZNet) Geomicrobiology cluster. Each sample is separated into a HF an a LF utilizing a 1.85 g cm-3 sodium polytungstate (3Na2WO4·9WO3·H2O or Na6 [H2W12O40]) solution. The resultant fractions are run for percent carbon (C) and nitrogen (N) and their associated stable isotopes (δ13C and δ15N) to offer novel insights in soil organic matter processes. Samples that were either too small for analytical analysis or below instrument detection limit are labeled with BDL. 

Summary Coarse roots represent a globally important belowground carbon pool, but the factors controlling coarse root decomposition rates remain poorly understood relative to other plant biomass components. We compiled the most comprehensive dataset of coarse root decomposition data including 148 observations from 60 woody species, and linked coarse root decomposition rates to plant traits, phylogeny and climate to address questions of the dominant controls on coarse root decomposition.We found that decomposition rates increased with mean annual temperature, root nitrogen and phosphorus concentrations. Coarse root decomposition was slower for ectomycorrhizal than arbuscular mycorrhizal associated species, and angiosperm species decomposed faster than gymnosperms. Coarse root decomposition rates and calcium concentrations showed a strong phylogenetic signal.Our findings suggest that categorical traits like mycorrhizal association and phylogenetic group, in conjunction with root quality and climate, collectively serve as the optimal predictors of coarse root decomposition rates.Our findings propose a paradigm of the dominant controls on coarse decomposition, with mycorrhizal association and phylogeny acting as critical roles on coarse root decomposition, necessitating their explicit consideration in Earth‐system models and ultimately improving confidence in projected carbon cycle–climate feedbacks. 

This data is an on-going collection of soil temperature, soil moisture, soil CO2 concentration, and soil O2 concentration starting in October 2021. We have installed sensors and probes at different soil depths across landscapes in five of the former Critical Zone Observatory locations (see the document named "sensor location"). Soil temperature and moisture are measured using Acclima SDI-12 sensors. Soil CO2 concentrations are measured using Eosense CO2 probes (switching to Vaisala GMP343 and GMP251 in 2023). Soil O2 concentrations are measured using Apogee SO-110-L-10 soil oxygen sensors. This dataset, along with our measurements of soil geomicrobiology and biogeochemistry (available in EarthChem), will help us understand the role of microbes as drivers of Critical Zone biogeochemistry and soil formation. 

Abstract Increasing hurricane frequency and intensity with climate change is likely to affect soil organic carbon (C) stocks in tropical forests. We examined the cycling of C between soil pools and with depth at the Luquillo Experimental Forest in Puerto Rico in soils over a 30‐year period that spanned repeated hurricanes. We used a nonlinear matrix model of soil C pools and fluxes (“soilR”) and constrained the parameters with soil and litter survey data. Soil chemistry and stable and radiocarbon isotopes were measured from three soil depths across a topographic gradient in 1988 and 2018. Our results suggest that pulses and subsequent reduction of inputs caused by severe hurricanes in 1989, 1998, and two in 2017 led to faster mean transit times of soil C in 0–10 cm and 35–60 cm depths relative to a modeled control soil with constant inputs over the 30‐year period. Between 1988 and 2018, the occluded C stock increased and δ¹³C in all pools decreased, while changes in particulate and mineral‐associated C were undetectable. The differences between 1988 and 2018 suggest that hurricane disturbance results in a dilution of the occluded light C pool with an influx of young, debris‐deposited C, and possible microbial scavenging of old and young C in the particulate and mineral‐associated pools. These effects led to a younger total soil C pool with faster mean transit times. Our results suggest that the increasing frequency of intense hurricanes will speed up rates of C cycling in tropical forests, making soil C more sensitive to future tropical forest stressors. 

Abstract Lowland tropical forest soils are relatively N rich and are the largest global source of N₂O (a powerful greenhouse gas) to the atmosphere. Despite the importance of tropical N cycling, there have been few direct measurements of N₂(an inert gas that can serve as an alternate fate for N₂O) in tropical soils, limiting our ability to characterize N budgets, manage soils to reduce N₂O production, or predict the future role that N limitation to primary productivity will play in buffering against climate change. We collected soils from across macro‐ and micro‐topographic gradients that have previously been shown to differ in O₂availability and trace gas emissions. We then incubated these soils under oxic and anoxic headspaces to explore the relative effect of soil location versus transient redox conditions. No matter where the soils came from, or what headspace O₂was used in the incubation, N₂emissions dominated the flux of N gas losses. In the macrotopography plots, production of N₂and N₂O were higher in low O₂valleys than on more aerated ridges and slopes. In the microtopography plots, N₂emissions from plots with lower mean soil O₂(5%–10%) were greater than in plots with higher mean soil O₂(10%–20%). We estimate an N gas flux of ∼37 kg N/ha/yr from this forest, 99% as N₂. These results suggest that N₂fluxes may have been systematically underestimated in these landscapes, and that the measurements we present call for a reevaluation of the N budgets in lowland tropical forest ecosystems. 

Soil nitrous oxide (N 2 O) emissions are an important driver of climate change and are a major mechanism of labile nitrogen (N) loss from terrestrial ecosystems. Evidence increasingly suggests that locations on the landscape that experience biogeochemical fluxes disproportionate to the surrounding matrix (hot spots) and time periods that show disproportionately high fluxes relative to the background (hot moments) strongly influence landscape-scale soil N 2 O emissions. However, substantial uncertainties remain regarding how to measure and model where and when these extreme soil N 2 O fluxes occur. High-frequency datasets of soil N 2 O fluxes are newly possible due to advancements in field-ready instrumentation that uses cavity ring-down spectroscopy (CRDS). Here, we outline the opportunities and challenges that are provided by the deployment of this field-based instrumentation and the collection of high-frequency soil N 2 O flux datasets. While there are substantial challenges associated with automated CRDS systems, there are also opportunities to utilize these near-continuous data to constrain our understanding of dynamics of the terrestrial N cycle across space and time. Finally, we propose future research directions exploring the influence of hot moments of N 2 O emissions on the N cycle, particularly considering the gaps surrounding how global change forces are likely to alter N dynamics in the future.